Uses of Class
jebl.evolution.align.ProfileCharacter
Packages that use ProfileCharacter
Package
Description
Provides classes and interfaces for pairwise alignment of two sequences.
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Uses of ProfileCharacter in jebl.evolution.align
Methods in jebl.evolution.align that return ProfileCharacterModifier and TypeMethodDescriptionstatic ProfileCharacterProfileCharacter.getImmutableProfileCharacter(char character) An immutable ProfileCharacter that uses less memory than a mutable profile character.Methods in jebl.evolution.align with parameters of type ProfileCharacterModifier and TypeMethodDescriptionvoidProfileCharacter.addProfileCharacter(ProfileCharacter character) voidProfileCharacter.removeProfileCharacter(ProfileCharacter character) static floatProfileCharacter.score(ProfileCharacter character1, ProfileCharacter character2, Scores scores) static floatProfileCharacter.scoreSelf(ProfileCharacter character, Scores scores)