Uses of Interface
jebl.evolution.substmodel.RateMatrix
Packages that use RateMatrix
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Uses of RateMatrix in jebl.evolution.align.scores
Constructors in jebl.evolution.align.scores with parameters of type RateMatrix -
Uses of RateMatrix in jebl.evolution.substmodel
Classes in jebl.evolution.substmodel that implement RateMatrixModifier and TypeClassDescriptionclassabstract base class for all rate matricesclassbase class of rate matrices for amino acidsclassWAG model of amino acid evolution (S.Methods in jebl.evolution.substmodel with parameters of type RateMatrixModifier and TypeMethodDescriptionvoidMatrixExponential.setMatrix(RateMatrix r) update rate matrix used in present moduleConstructors in jebl.evolution.substmodel with parameters of type RateMatrix