Class AbstractNode

Method Details

• getTaxonIterator

  public Iterator getTaxonIterator(int depth)

  Specified by:

  getTaxonIterator in interface ComparisonBrowserNode

• getLineageIterator

  public Iterator getLineageIterator()

  Specified by:

  getLineageIterator in interface ComparisonBrowserNode

• getDetailIterator

  public abstract Iterator getDetailIterator(float conf)

  Specified by:

  getDetailIterator in interface ComparisonBrowserNode

• changeConfidence

  public abstract void changeConfidence(SigCalculator cal)

  Specified by:

  changeConfidence in interface ComparisonBrowserNode

• findNode

  public abstract ComparisonBrowserNode findNode(int id)

  Specified by:

  findNode in interface ComparisonBrowserNode

• getName

  public abstract String getName()

  Specified by:

  getName in interface Taxon

• getRank

  public abstract String getRank()

  Specified by:

  getRank in interface Taxon

• getTaxid

  public abstract int getTaxid()

  Specified by:

  getTaxid in interface Taxon

• getS1Count

  public int getS1Count()

  Specified by:

  getS1Count in interface Taxon

• getS2Count

  public int getS2Count()

  Specified by:

  getS2Count in interface Taxon

• getDoubleSignificance

  public double getDoubleSignificance()

• getSignificance

  public String getSignificance()

  Specified by:

  getSignificance in interface Taxon

• getIndent

  public int getIndent()

  Specified by:

  getIndent in interface Taxon